C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477936 RP11-113C12.2-001 ENSG00000243830 9606 + 12:8460618-8461232 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000477936
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000477936 0.056±0.00 0.058±0.00 0.118±0.00 0.055±0.00 0.053±0.00 0.058±0.00 0.051±0.00 0.104±0.00 0.549±0.00 0.040±0.00 0.086±0.00 0.131±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XR CIL_0003XR_000C CGP 12:8455926-8522366

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 721
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 721
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 721
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 721
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 715
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 715
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 5e-39 165

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