C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422915 RP1-40G4P.1-001 ENSG00000231369 9606 - 22:26886909-26887548 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000422915
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000422915 0.287±0.00 0.575±0.00 0.037±0.00 0.221±0.01 0.194±0.00 0.123±0.00 0.035±0.00 0.157±0.13 0.406±0.25 0.291±0.00 0.192±0.12 0.586±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 534
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 534
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 534
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 534
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 532
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 532
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000119248 Gm15572-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 209
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 3e-40 169
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 4e-39 165

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