C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13545
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119044 Gm13545-001 ENSMUSG00000082408 10090 + 2:58338347-58338828 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000119044
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000119044 0.491±0.26 0.431±0.00 0.046±0.00 0.003±0.00 0.348±0.28 0.307±0.10 0.117±0.00 0.124±0.08 0.384±0.00 0.015±0.00 0.199±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000755 CIL_000755_0002 CGP 2:58129137-58357895
CIL_000752 CIL_000752_0002 CGP 2:58267453-58567157

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 303
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 261
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 291
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 246
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 298
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 241
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 303
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 303
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 309
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 303
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 3e-37 159
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 5e-35 152
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 206
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.0000000004 69
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 226
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 303
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 298
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 303
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 189

Loading