C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13292
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120014 Gm13292-001 ENSMUSG00000082424 10090 - 2:11409035-11410031 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120014
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120014 0.066±0.02 0.099±0.02 0.055±0.01 6.144±8.54 0.151±0.02 0.084±0.02 0.124±0.07 0.087±0.04 6.683±13.26 0.065±0.00 0.246±0.10 0.166±0.09 0.075±0.01 0.030±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QE CIL_0000QE_0002 CGP 2:11172113-11502101

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 477
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1253
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 976
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1227
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1253
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1253
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 994
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 946
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1050
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 926
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 329
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 658
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 913
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 859
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1133
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 959
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 758
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 675
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 909
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 617
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 763
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 857
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 701
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 691
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 688
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 3e-33 143
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 593
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 856
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1177
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 869
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 632
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 976
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 976
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 652
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 878
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 924
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 935
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 1016
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 708
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 315
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 961
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 1007
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 634
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 898
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 787
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 787
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 617
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1107

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