C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13121
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120637 Gm13121-001 ENSMUSG00000083390 10090 - 4:144526411-144527042 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverOvaryPlacentaTestisENSMUST00000120637
Transcript ID Bladder Brain Breast Kidney Liver Ovary Placenta Testis
ENSMUST00000120637 0.028±0.00 0.099±0.00 0.191±0.00 0.073±0.00 0.013±0.00 0.149±0.00 0.091±0.08 0.184±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000255320 HMGB1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 795
ENST00000326004 HMGB1-003 protein_coding Homo_sapiens 0 606
ENST00000339872 HMGB1-001 protein_coding Homo_sapiens 0 791
ENST00000341423 HMGB1-004 protein_coding Homo_sapiens 0 791
ENST00000399489 HMGB1-009 protein_coding Homo_sapiens 0 606
ENST00000399494 HMGB1-011 protein_coding Homo_sapiens 0 791
ENST00000405805 HMGB1-012 protein_coding Homo_sapiens 0 791
ENST00000406019 HMGB1P13-001 processed_pseudogene Homo_sapiens 0 516
ENST00000429856 HMGB1P9-001 processed_pseudogene Homo_sapiens 0 623
ENST00000455362 HMGB1P4-001 processed_pseudogene Homo_sapiens 0 601
ENST00000468384 HMGB1-007 processed_transcript Homo_sapiens 0 217
ENST00000490788 HMGB1-008 processed_transcript Homo_sapiens 0 270
ENST00000522557 HMGB1P1-001 processed_pseudogene Homo_sapiens 0 745
ENST00000558211 HMGB1P8-001 processed_pseudogene Homo_sapiens 0 279
ENST00000569046 RP11-673C5.1-001 processed_pseudogene Homo_sapiens 0 761

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