| Transcript ID | Ovary | Placenta | Testis |
|---|---|---|---|
| ENST00000468384 | 149.717±0.00 | 48.529±0.00 | 12.604±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | high mobility group box 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000468384  |
HMGB1-007 |
ENSG00000189403 |
9606 | - |
13:30463311-30465914  |
processed_transcript |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004CF | CIL_0004CF_0001 | CGP | 13:30456704-30660770 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000178049
|
Gm21596-201 | processed_pseudogene | Mus_musculus | 0 | 440 |
|
ENSMUST00000085546
|
Hmgb1-001 | protein_coding | Mus_musculus | 0 | 440 |
|
ENSMUST00000133667
|
Hmgb1-004 | retained_intron | Mus_musculus | 0 | 436 |
|
ENSMUST00000139443
|
Hmgb1-006 | retained_intron | Mus_musculus | 0 | 427 |
|
ENSMUST00000123645
|
Hmgb1-005 | retained_intron | Mus_musculus | 0 | 396 |
|
ENSMUST00000125605
|
Hmgb1-008 | protein_coding | Mus_musculus | 0 | 333 |
|
ENSMUST00000138553
|
Hmgb1-007 | protein_coding | Mus_musculus | 0 | 246 |
|
ENSMUST00000093196
|
Hmgb1-002 | protein_coding | Mus_musculus | 0 | 246 |
|
ENSMUST00000110505
|
Hmgb1-003 | protein_coding | Mus_musculus | 0 | 246 |
|
ENSMUST00000119715
|
Gm5937-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000118415
|
Hmgb1-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000162030
|
AC098736.2-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000179821
|
RP24-388H6.4-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000120421
|
Gm15387-001 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000084171
|
Gm5518-201 | processed_pseudogene | Mus_musculus | 0 | 233 |
|
ENSMUST00000119350
|
Hmgb1-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 228 |
|
ENSMUST00000117548
|
Hmgb1-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 228 |
|
ENSMUST00000173370
|
Hmgb1-ps7-001 | processed_pseudogene | Mus_musculus | 0 | 228 |
|
ENSMUST00000118281
|
Hmgb1-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 226 |
|
ENSMUST00000119503
|
Hmgb1-ps6-001 | processed_pseudogene | Mus_musculus | 0 | 226 |
|
ENSMUST00000121589
|
Gm11645-001 | processed_pseudogene | Mus_musculus | 0 | 224 |
|
ENSMUST00000119126
|
Gm9078-001 | processed_pseudogene | Mus_musculus | 0 | 224 |
|
ENSMUST00000120637
|
Gm13121-001 | processed_pseudogene | Mus_musculus | 0 | 217 |
|
ENSMUST00000180890
|
Gm26585-001 | processed_pseudogene | Mus_musculus | 0 | 217 |
|
ENSMUST00000179326
|
Gm5473-201 | processed_pseudogene | Mus_musculus | 0 | 217 |
|
ENSMUST00000181542
|
Hmgb1-ps8-001 | processed_pseudogene | Mus_musculus | 0 | 217 |
|
ENSMUST00000121009
|
Gm14049-001 | processed_pseudogene | Mus_musculus | 0 | 211 |
|
ENSMUST00000122269
|
Gm14473-001 | processed_pseudogene | Mus_musculus | 0 | 200 |
|
ENSMUST00000120842
|
Gm8152-001 | processed_pseudogene | Mus_musculus | 0 | 191 |
|
ENSMUST00000128343
|
Gm3160-001 | processed_pseudogene | Mus_musculus | 4e-19 | 99 |
