C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147121 Rpl15-003 ENSMUSG00000012405 10090 - 14:18269304-18271391 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000147121
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000147121 52.745±0.00 165.172±0.00 40.695±9.92 33.740±0.00 47.915±0.22 42.056±4.67 226.710±204.40 26.333±3.44 53.691±14.43

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 449
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 449
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 431
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 436
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 449
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 449
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 449
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 370
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 449
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 449
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 449
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 261
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 302
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 403
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 261
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 449

Loading