C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15 pseudogene 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482912 RPL15P20-001 ENSG00000215003 9606 - 16:15931697-15932294 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleENST00000482912
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle
ENST00000482912 0.085±0.00 0.090±0.00 0.195±0.00 0.031±0.00 0.056±0.00 0.061±0.00 0.026±0.00 0.028±0.00 0.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MS CIL_0006MS_0001 CGP 16:15865720-16143074

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 641
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 636
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 636
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 636
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 636
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 630
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 302
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 5.99756e-43 178
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 2e-37 159

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