C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422218 RPL15-009 ENSG00000174748 9606 + 3:23916591-23919286 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000422218
Transcript ID Ovary Placenta Testis
ENST00000422218 308.139±0.00 465.726±0.00 317.561±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EM CIL_0002EM_0002 CGP 3:23891660-23946591
CIL_0002VH CIL_0002VH_0002 CGP 3:23916545-23980618

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 571
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 571
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 571
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 569
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 556
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 551
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 449
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 0 207

Loading