C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439981 RPL15P1-001 ENSG00000227343 9606 - 20:18090116-18090715 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLungTestisENST00000439981
Transcript ID Adrenal Brain Heart Lung Testis
ENST00000439981 0.028±0.00 0.060±0.00 0.025±0.00 0.025±0.00 0.025±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YD CIL_0008YD_0001 VISTA 20:17559199-18160694

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 545
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 540
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 540
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 540
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 540
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 540
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 529
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 241

Loading