C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156372 Rps19-007 ENSMUSG00000040952 10090 + 7:24884813-24888930 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000156372
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000156372 143.762±27.14 36.549±7.08 102.876±28.76 106.881±19.79 136.270±16.16 35.577±9.44 92.097±11.05 93.210±55.05 94.588±3.78 56.245±8.25 286.066±239.73 643.023±167.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WP CIL_0003WP_0002 CGP 7:24870057-24889806
CIL_0003W3 CIL_0003W3_0002 CGP 7:24884371-24902197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 553
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 394
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 490
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 379
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 316
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 412
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 460
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 568
ENST00000598261 RPS19-007 protein_coding Homo_sapiens 0 361
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000598466 RPS19-004 retained_intron Homo_sapiens 0 268
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 569
ENST00000600467 RPS19-002 protein_coding Homo_sapiens 0 348
ENST00000601492 RPS19-003 protein_coding Homo_sapiens 0 268

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