C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5976
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180794 Gm5976-001 ENSMUSG00000097833 10090 - 1:52503234-52504229 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180794
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180794 0.369±0.17 0.176±0.09 0.295±0.02 0.113±0.06 0.774±0.18 0.255±0.10 0.174±0.04 0.175±0.06 0.099±0.06 0.830±0.16 0.048±0.02 0.944±0.43 0.051±0.02 0.149±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002RZ CIL_0002RZ_0002 CGP 1:52457294-52651919

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 285
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 976
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 231
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 961
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 976
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 976
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 435
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 693
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 789
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 658
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 883
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 795
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 547
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 721
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 713
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 603
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 564
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 695
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 311
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 621
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 889
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 231
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 231
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 231
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 453
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 713
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 719
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 767
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 4.00001e-41 171
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 302
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 778
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 747
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 621
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 660
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 571
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 571
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 444

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