C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4691
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182339 Gm4691-001 ENSMUSG00000097979 10090 - 6:128202150-128203233 transcribed_processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartLiverMuscleOvaryPlacentaENSMUST00000182339
Transcript ID Adrenal Bladder Breast Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000182339 0.117±0.07 0.424±0.07 0.146±0.00 0.077±0.02 0.263±0.03 0.161±0.06 1.816±0.82 0.204±0.12 0.093±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1232
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 950
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1206
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1232
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1232
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 560
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 979
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 926
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1048
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 902
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 335
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 627
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 893
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 833
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1118
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 950
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 752
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 652
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 898
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 603
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 732
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 846
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 680
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 673
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 664
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 4e-32 139
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 568
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 846
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1158
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 845
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 612
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 950
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 950
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 643
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 872
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 898
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 909
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 998
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 693
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 289
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 298
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 924
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 957
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 987
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 883
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 773
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 773
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 603
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1086

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