C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 18822
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182857 Gm18822-001 ENSMUSG00000098047 10090 - 3:8615275-8616504 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLungOvaryPlacentaENSMUST00000182857
Transcript ID Brain Breast Kidney Lung Ovary Placenta
ENSMUST00000182857 0.027±0.01 0.160±0.15 0.036±0.00 0.070±0.01 0.080±0.04 0.010±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OY CIL_0002OY_0002 CGP 3:8509527-8667039
CIL_0008LP CIL_0008LP_0002 VISTA 3:8565055-9167293

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 865
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 850
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 865
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 865
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 342
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 656
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 608
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 691
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 560
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 584
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 756
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 676
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 422
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 544
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 401
ENST00000447061 GAPDHP25-001 processed_pseudogene Homo_sapiens 0 588
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 294
ENST00000449411 GAPDHP74-001 processed_pseudogene Homo_sapiens 0 254
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 785
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 355
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 619
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 233
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 569
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 691
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 625
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 549
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 566
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 516
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 516
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 363
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 791

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