C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9211
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182882 Gm9211-001 ENSMUSG00000098016 10090 + 7:36234292-36235266 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000182882
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182882 0.036±0.00 0.025±0.00 0.196±0.12 0.074±0.00 0.033±0.00 0.035±0.00 0.028±0.02 0.047±0.01 0.097±0.00 0.005±0.00 0.966±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082H CIL_00082H_0002 VISTA 7:35833666-36434869
CIL_0007OB CIL_0007OB_0005 UCNEbase 7:35865981-38051259
CIL_0008XK CIL_0008XK_0002 VISTA 7:36031252-36631999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 833
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 601
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 813
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 833
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 833
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 636
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 688
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 592
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 281
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 418
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 590
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 484
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 732
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 660
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 464
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 627
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 409
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 243
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 534
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 798
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 595
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 320
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 601
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 601
ENST00000489113 GAPDHP47-001 processed_pseudogene Homo_sapiens 0 363
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 608
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 599
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 599
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 654
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 385
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 616
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 303
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 555
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 603
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 664
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 532
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 721

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