C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2193
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183246 Gm2193-001 ENSMUSG00000098149 10090 - 8:41608668-41609669 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverOvaryPlacentaENSMUST00000183246
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Ovary Placenta
ENSMUST00000183246 0.086±0.03 0.061±0.00 0.024±0.00 0.031±0.01 0.258±0.22 0.060±0.03 0.030±0.00 0.014±0.01 0.043±0.00 0.043±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1129
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 1026
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1107
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1129
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1129
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 931
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 833
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 961
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 832
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 287
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 828
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 776
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 625
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 861
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 857
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 547
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 688
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 808
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 656
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 689
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 638
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 525
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 756
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1086
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 793
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 551
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 898
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 898
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 778
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 806
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 898
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 861
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 804
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 833
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 893
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 545
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1020

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