C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8565
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183259 Gm8565-001 ENSMUSG00000098006 10090 - 3:69566451-69567464 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000183259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000183259 0.155±0.04 0.095±0.00 0.206±0.06 0.234±0.12 0.284±0.33 0.097±0.00 0.081±0.05 0.093±0.02 0.114±0.19 0.042±0.00 0.228±0.13 0.154±0.09 0.048±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Z8 CIL_0001Z8_0002 CGP 3:69316861-69598861

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 302
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 929
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 806
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 929
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 929
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 929
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 433
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 763
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 686
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 802
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 688
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 518
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 673
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 682
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 832
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 752
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 680
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 451
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 566
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 638
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 501
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 534
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 630
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 403
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 883
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 462
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 806
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 806
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 706
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 664
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 553
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 676
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 758
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 774
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 675
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 662
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 662
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 459
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 926

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