C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 2, blastocyst
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184502 H2-Bl-008 ENSMUSG00000073406 10090 - 17:36080189-36084223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverLungMuscleOvaryPlacentaENSMUST00000184502
Transcript ID Adrenal Liver Lung Muscle Ovary Placenta
ENSMUST00000184502 0.058±0.00 0.083±0.03 0.045±0.00 0.087±0.00 0.079±0.00 0.210±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 IEA antigen processing and presentation of peptide antigen via MHC class I
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006955 IEA immune response
GO:0009986 IDA cell surface
GO:0016021 IDA integral component of membrane
GO:0042270 IDA protection from natural killer cell mediated cytotoxicity
GO:0042605 IEA peptide antigen binding
GO:0042612 IEA MHC class I protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376228 HLA-C-001 protein_coding Homo_sapiens 0 370
ENST00000376237 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000376802 HLA-A-003 protein_coding Homo_sapiens 0 348
ENST00000376806 HLA-A-002 protein_coding Homo_sapiens 0 348
ENST00000376809 HLA-A-201 protein_coding Homo_sapiens 0 348
ENST00000376822 HLA-A-003 protein_coding Homo_sapiens 0 381
ENST00000383323 HLA-C-003 protein_coding Homo_sapiens 0 350
ENST00000383329 HLA-C-002 protein_coding Homo_sapiens 0 370
ENST00000383483 HLA-C-004 protein_coding Homo_sapiens 0 350
ENST00000383487 HLA-C-003 protein_coding Homo_sapiens 0 350
ENST00000383605 HLA-A-001 protein_coding Homo_sapiens 0 381
ENST00000383619 HLA-A-002 protein_coding Homo_sapiens 0 381
ENST00000396634 HLA-A-001 protein_coding Homo_sapiens 0 348
ENST00000400341 HLA-C-001 protein_coding Homo_sapiens 0 350
ENST00000400394 HLA-C-001 protein_coding Homo_sapiens 0 350
ENST00000400395 HLA-C-004 protein_coding Homo_sapiens 0 350
ENST00000412585 HLA-B-001 protein_coding Homo_sapiens 0 377
ENST00000413609 HLA-A-003 protein_coding Homo_sapiens 0 342
ENST00000414249 HLA-C-004 protein_coding Homo_sapiens 0 377
ENST00000414592 HLA-A-003 protein_coding Homo_sapiens 0 353
ENST00000414908 HLA-U-001 unprocessed_pseudogene Homo_sapiens 6e-23 110
ENST00000415537 HLA-C-007 protein_coding Homo_sapiens 0 370
ENST00000416726 HLA-B-006 protein_coding Homo_sapiens 3e-28 130
ENST00000418981 HLA-U-001 unprocessed_pseudogene Homo_sapiens 3e-16 88
ENST00000419135 HLA-C-003 protein_coding Homo_sapiens 0 366
ENST00000419369 HLA-U-001 unprocessed_pseudogene Homo_sapiens 6e-23 110
ENST00000419590 HLA-C-002 protein_coding Homo_sapiens 0 377
ENST00000420206 HLA-C-001 protein_coding Homo_sapiens 0 366
ENST00000422726 HLA-C-002 protein_coding Homo_sapiens 0 370
ENST00000422921 HLA-C-004 protein_coding Homo_sapiens 0 366
ENST00000423509 HLA-C-003 protein_coding Homo_sapiens 0 370
ENST00000424832 HLA-C-001 protein_coding Homo_sapiens 0 370
ENST00000425798 HLA-B-006 protein_coding Homo_sapiens 3e-33 147
ENST00000425848 HLA-B-001 protein_coding Homo_sapiens 0 388
ENST00000426349 HLA-U-001 unprocessed_pseudogene Homo_sapiens 6e-18 94
ENST00000429840 HLA-C-002 protein_coding Homo_sapiens 0 366
ENST00000430940 HLA-C-004 protein_coding Homo_sapiens 0 370
ENST00000433153 HLA-C-004 protein_coding Homo_sapiens 0 366
ENST00000434333 HLA-B-003 protein_coding Homo_sapiens 0 355
ENST00000434884 HLA-C-002 protein_coding Homo_sapiens 0 350
ENST00000437368 HLA-C-007 protein_coding Homo_sapiens 0 377
ENST00000437866 HLA-B-003 protein_coding Homo_sapiens 0 372
ENST00000438171 HLA-C-001 protein_coding Homo_sapiens 0 377
ENST00000438861 HLA-A-002 protein_coding Homo_sapiens 0 342
ENST00000442622 HLA-U-001 unprocessed_pseudogene Homo_sapiens 3e-21 104
ENST00000445075 HLA-C-007 protein_coding Homo_sapiens 0 366
ENST00000445222 HLA-B-003 protein_coding Homo_sapiens 0 366
ENST00000445948 HLA-U-001 unprocessed_pseudogene Homo_sapiens 6e-23 110
ENST00000448362 HLA-C-007 protein_coding Homo_sapiens 0 350
ENST00000449884 HLA-C-007 protein_coding Homo_sapiens 0 350
ENST00000450342 HLA-A-003 protein_coding Homo_sapiens 0 337
ENST00000450871 HLA-B-001 protein_coding Homo_sapiens 0 387
ENST00000453057 HLA-A-001 protein_coding Homo_sapiens 0 342
ENST00000453809 HLA-C-003 protein_coding Homo_sapiens 0 377
ENST00000453975 HLA-A-003 protein_coding Homo_sapiens 0 342
ENST00000454033 HLA-C-007 protein_coding Homo_sapiens 0 366
ENST00000454091 HLA-A-001 protein_coding Homo_sapiens 0 353
ENST00000455882 HLA-A-002 protein_coding Homo_sapiens 0 342
ENST00000456012 HLA-A-001 protein_coding Homo_sapiens 0 337
ENST00000456487 HLA-C-002 protein_coding Homo_sapiens 0 366
ENST00000457806 HLA-C-007 protein_coding Homo_sapiens 0 370
ENST00000457879 HLA-A-001 protein_coding Homo_sapiens 0 342
ENST00000457903 HLA-C-001 protein_coding Homo_sapiens 0 366
ENST00000458192 HLA-C-003 protein_coding Homo_sapiens 0 366
ENST00000458668 HLA-C-002 protein_coding Homo_sapiens 0 350
ENST00000460542 HLA-A-006 retained_intron Homo_sapiens 1e-37 161
ENST00000461285 HLA-C-005 retained_intron Homo_sapiens 5e-33 147
ENST00000461470 HLA-C-005 retained_intron Homo_sapiens 5e-33 147
ENST00000461583 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000461903 HLA-A-007 retained_intron Homo_sapiens 4e-38 163
ENST00000461937 HLA-C-009 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000461996 HLA-A-006 retained_intron Homo_sapiens 0 189
ENST00000462184 HLA-A-007 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000462536 HLA-A-005 retained_intron Homo_sapiens 1.4013e-45 189
ENST00000462851 HLA-C-008 retained_intron Homo_sapiens 0 364
ENST00000462986 HLA-A-007 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000463148 HLA-A-004 retained_intron Homo_sapiens 1.99993e-41 174
ENST00000464623 HLA-C-012 retained_intron Homo_sapiens 1e-26 124
ENST00000464713 HLA-A-005 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000464914 HLA-C-009 nonsense_mediated_decay Homo_sapiens 0 368
ENST00000465497 HLA-C-005 retained_intron Homo_sapiens 5e-38 163
ENST00000467922 HLA-C-008 retained_intron Homo_sapiens 0 344
ENST00000468666 HLA-A-004 retained_intron Homo_sapiens 1e-34 152
ENST00000469544 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000469883 HLA-B-002 retained_intron Homo_sapiens 3e-38 163
ENST00000470176 HLA-C-008 retained_intron Homo_sapiens 0 333
ENST00000470534 HLA-A-007 retained_intron Homo_sapiens 1e-37 161
ENST00000470780 HLA-A-002 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000470915 HLA-B-002 retained_intron Homo_sapiens 1e-31 141
ENST00000471291 HLA-A-005 retained_intron Homo_sapiens 2e-37 161
ENST00000471639 HLA-B-004 nonsense_mediated_decay Homo_sapiens 0 387
ENST00000473059 HLA-A-005 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000474381 HLA-B-009 retained_intron Homo_sapiens 0 318
ENST00000476132 HLA-A-007 retained_intron Homo_sapiens 1e-37 161
ENST00000476248 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000478186 HLA-A-004 retained_intron Homo_sapiens 1e-34 152
ENST00000478258 HLA-A-006 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000478740 HLA-A-004 retained_intron Homo_sapiens 5.00264e-43 180
ENST00000479320 HLA-A-006 retained_intron Homo_sapiens 4e-38 163
ENST00000479494 HLA-A-006 retained_intron Homo_sapiens 1e-37 161
ENST00000479527 HLA-C-008 retained_intron Homo_sapiens 0 333
ENST00000479546 HLA-C-009 processed_transcript Homo_sapiens 0 366
ENST00000479595 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000480429 HLA-C-008 retained_intron Homo_sapiens 0 361
ENST00000481018 HLA-A-006 retained_intron Homo_sapiens 1.00053e-42 178
ENST00000481588 HLA-C-005 retained_intron Homo_sapiens 3e-31 141
ENST00000482006 HLA-C-012 retained_intron Homo_sapiens 5e-25 119
ENST00000482179 HLA-C-012 retained_intron Homo_sapiens 2e-28 130
ENST00000484378 HLA-C-012 retained_intron Homo_sapiens 1e-26 124
ENST00000485321 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000487245 HLA-C-005 retained_intron Homo_sapiens 9e-36 156
ENST00000487534 HLA-A-005 retained_intron Homo_sapiens 2e-37 161
ENST00000488273 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000488889 HLA-A-002 processed_transcript Homo_sapiens 0 353
ENST00000491984 HLA-C-006 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000492107 HLA-A-007 retained_intron Homo_sapiens 0 189
ENST00000492759 HLA-A-004 retained_intron Homo_sapiens 1.99993e-41 174
ENST00000494823 HLA-C-008 retained_intron Homo_sapiens 0 350
ENST00000494871 HLA-C-009 processed_transcript Homo_sapiens 0 350
ENST00000495183 HLA-A-005 retained_intron Homo_sapiens 5e-38 163
ENST00000495207 HLA-C-012 retained_intron Homo_sapiens 5e-30 135
ENST00000495614 HLA-C-012 retained_intron Homo_sapiens 1e-26 124
ENST00000495635 HLA-C-005 retained_intron Homo_sapiens 3e-36 158
ENST00000495725 HLA-C-009 processed_transcript Homo_sapiens 0 366
ENST00000495835 HLA-C-008 retained_intron Homo_sapiens 0 364
ENST00000495898 HLA-C-009 processed_transcript Homo_sapiens 0 377
ENST00000496081 HLA-A-004 retained_intron Homo_sapiens 5e-38 163
ENST00000496419 HLA-C-005 retained_intron Homo_sapiens 4e-34 150
ENST00000497204 HLA-C-012 retained_intron Homo_sapiens 5e-25 119
ENST00000498007 HLA-B-002 retained_intron Homo_sapiens 7e-30 135
ENST00000547271 HLA-A-214 protein_coding Homo_sapiens 0 342
ENST00000547522 HLA-A-209 protein_coding Homo_sapiens 0 342
ENST00000549224 HLA-A-203 protein_coding Homo_sapiens 0 381
ENST00000550728 HLA-A-213 protein_coding Homo_sapiens 0 337
ENST00000552493 HLA-A-205 protein_coding Homo_sapiens 0 353
ENST00000611149 HLA-A-210 protein_coding Homo_sapiens 0 342
ENST00000612644 HLA-A-206 protein_coding Homo_sapiens 0 353
ENST00000616730 HLA-A-204 protein_coding Homo_sapiens 0 381
ENST00000620168 HLA-A-202 protein_coding Homo_sapiens 0 272
ENST00000620806 HLA-C-201 protein_coding Homo_sapiens 0 398

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