C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000310055 RP11-344H11.4-001 ENSG00000172746 9606 + 1:26980165-26980975 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000310055
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000310055 0.308±0.00 0.327±0.00 0.034±0.00 0.033±0.00 0.156±0.09 0.147±0.00 0.066±0.00 0.245±0.00 0.448±0.00 0.144±0.03 0.262±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 520
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 520
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 514
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 497
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 486
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 381
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 202
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 6.00036e-42 174
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 5e-38 161
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 1e-34 150
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 2e-27 126

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