Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:
ENST00000310055	RP11-344H11.4-001	ENSG00000172746	9606	+	1:26980165-26980975	unprocessed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Lung	Muscle	Ovary	Testis
ENST00000310055	0.308±0.00	0.327±0.00	0.034±0.00	0.033±0.00	0.156±0.09	0.147±0.00	0.066±0.00	0.245±0.00	0.448±0.00	0.144±0.03	0.262±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007T4	CIL_0007T4_0001	VISTA	1:26423129-27024414

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000092620	Gm10275-002	processed_transcript	Mus_musculus	0	520
ENSMUST00000126610	Rpl12-001	protein_coding	Mus_musculus	0	520
ENSMUST00000168697	Gm10275-001	transcribed_processed_pseudogene	Mus_musculus	0	514
ENSMUST00000119608	Gm11425-001	processed_pseudogene	Mus_musculus	0	497
ENSMUST00000121857	Gm15793-001	processed_pseudogene	Mus_musculus	0	497
ENSMUST00000116168	Rpl12-ps1-001	processed_pseudogene	Mus_musculus	0	497
ENSMUST00000076703	Gm9396-001	protein_coding	Mus_musculus	0	497
ENSMUST00000102811	Rpl12-002	processed_transcript	Mus_musculus	0	486
ENSMUST00000122012	Gm6285-001	processed_pseudogene	Mus_musculus	0	459
ENSMUST00000071515	Gm7117-001	processed_pseudogene	Mus_musculus	0	381
ENSMUST00000172474	Gm20430-001	processed_pseudogene	Mus_musculus	0	202
ENSMUST00000117322	Gm12038-001	processed_pseudogene	Mus_musculus	6.00036e-42	174
ENSMUST00000154340	Rpl12-003	processed_transcript	Mus_musculus	5e-38	161
ENSMUST00000134912	Rpl12-007	processed_transcript	Mus_musculus	1e-34	150
ENSMUST00000121669	Gm11745-001	processed_pseudogene	Mus_musculus	2e-27	126

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