C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 7117
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071515 Gm7117-001 ENSMUSG00000063442 10090 - X:105725128-105725514 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000071515
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000071515 0.379±0.19 0.257±0.00 0.034±0.00 0.836±0.80 0.357±0.00 1.585±0.67 0.246±0.07 0.065±0.03 0.157±0.03 0.679±0.04 0.107±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 381
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 435
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 444
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 1e-34 150
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 403
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 399
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 459
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 416
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 374
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 379
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 383
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 383
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 374
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 392
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 368
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 433
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 1e-28 128

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