C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15793
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121857 Gm15793-001 ENSMUSG00000082769 10090 - 1:66849108-66849602 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121857
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121857 0.359±0.20 0.159±0.01 0.446±0.10 0.187±0.02 0.599±0.19 0.367±0.15 0.175±0.10 0.225±0.13 0.303±0.15 0.264±0.06 0.257±0.14 0.533±0.18 0.173±0.06 0.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002J3 CIL_0002J3_0002 CGP 1:66719248-66863277

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 497
ENST00000361436 RPL12-001 protein_coding Homo_sapiens 0 584
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000413498 AC005682.7-001 processed_pseudogene Homo_sapiens 0 435
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 549
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 1.99965e-42 176
ENST00000431098 AC011737.2-001 processed_pseudogene Homo_sapiens 0 573
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 481
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 505
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 582
ENST00000433385 RPL12P15-001 processed_pseudogene Homo_sapiens 0 451
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000442319 RPL12P44-001 processed_pseudogene Homo_sapiens 0 355
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 544
ENST00000452430 RP11-501J20.3-001 processed_pseudogene Homo_sapiens 0 274
ENST00000460355 NBEAL1-003 retained_intron Homo_sapiens 0 573
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 462
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 536
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 512
ENST00000483598 RPL12-004 processed_transcript Homo_sapiens 0 231
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 488
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 501
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 462
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 475
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 457
ENST00000497322 RPL12-002 processed_transcript Homo_sapiens 0 470
ENST00000497825 RPL12-003 processed_transcript Homo_sapiens 0 534
ENST00000536368 RPL12-201 protein_coding Homo_sapiens 0 337
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 536
ENST00000599500 RPL12P41-001 processed_pseudogene Homo_sapiens 0 416
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 3e-33 143

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