C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2ag
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000359193 HIST1H2AG-001 ENSG00000196787 9606 + 6:27133042-27135291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000359193
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000359193 0.090±0.00 0.213±0.00 0.244±0.00 5.429±0.00 5.650±5.28 0.200±0.08 0.344±0.21 0.671±0.18 3.060±0.00 0.209±0.00 2.121±2.67 0.391±0.10 2.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096D CIL_00096D_0001 VISTA 6:27032592-27634418
CIL_0000UC CIL_0000UC_0003 CGP 6:27125897-27135291

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0008150 ND biological_process
GO:0019899 IPI enzyme binding
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070124 Hist1h2ai-001 protein_coding Mus_musculus 0 490
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0 488
ENSMUST00000102969 Hist1h2ae-001 protein_coding Mus_musculus 0 483
ENSMUST00000078756 Hist2h2aa2-001 protein_coding Mus_musculus 0 479
ENSMUST00000074976 Hist2h2aa1-001 protein_coding Mus_musculus 0 479
ENSMUST00000090776 Hist1h2ad-001 protein_coding Mus_musculus 0 477
ENSMUST00000081342 Hist1h2ap-001 protein_coding Mus_musculus 0 477
ENSMUST00000091745 Hist1h2ao-001 protein_coding Mus_musculus 0 477
ENSMUST00000171127 Hist1h2ac-001 protein_coding Mus_musculus 0 475
ENSMUST00000091742 Hist1h2ah-001 protein_coding Mus_musculus 0 473
ENSMUST00000091741 Hist1h2ag-001 protein_coding Mus_musculus 0 472
ENSMUST00000090782 Hist2h2ac-001 protein_coding Mus_musculus 0 472
ENSMUST00000074752 Hist1h2ak-001 protein_coding Mus_musculus 0 468
ENSMUST00000091751 Hist1h2an-001 protein_coding Mus_musculus 0 466
ENSMUST00000073261 Hist1h2af-001 protein_coding Mus_musculus 0 466
ENSMUST00000091708 Hist1h2al-201 protein_coding Mus_musculus 0 462
ENSMUST00000091710 Hist1h2aj-001 unprocessed_pseudogene Mus_musculus 0 414
ENSMUST00000052686 H2afx-001 protein_coding Mus_musculus 0 411
ENSMUST00000108817 Hist3h2a-001 protein_coding Mus_musculus 0 401
ENSMUST00000047697 Trim17-002 protein_coding Mus_musculus 0 401
ENSMUST00000074556 H2afj-001 protein_coding Mus_musculus 0 383
ENSMUST00000073115 Hist2h2ab-001 protein_coding Mus_musculus 0 344
ENSMUST00000072391 Hist1h2aa-001 protein_coding Mus_musculus 0 305
ENSMUST00000118168 Gm11336-001 unprocessed_pseudogene Mus_musculus 0 289
ENSDART00000127042 protein_coding Danio_rerio 0 285
ENSDART00000139269 protein_coding Danio_rerio 0 268
ENSDART00000123183 protein_coding Danio_rerio 0 265
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 62

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