C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392269 RP11-256K7.1-001 ENSG00000214089 9606 - 10:44414649-44415153 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000392269
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000392269 0.101±0.00 0.231±0.00 0.053±0.00 0.101±0.00 0.187±0.00 0.488±0.00 0.046±0.00 0.141±0.00 0.046±0.00 0.131±0.00 0.070±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QA CIL_0007QA_0001 VISTA 10:43961287-44562544

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078034 Rpl9-ps6-201 protein_coding Mus_musculus 0 521
ENSMUST00000120094 Rpl9-007 protein_coding Mus_musculus 0 516
ENSMUST00000057885 Rpl9-001 protein_coding Mus_musculus 0 516
ENSMUST00000075549 Rpl9-ps4-201 processed_pseudogene Mus_musculus 0 510
ENSMUST00000121601 Gm12110-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000140507 Rpl9-ps7-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000080545 Gm5451-201 processed_pseudogene Mus_musculus 0 499
ENSMUST00000119147 Rpl9-ps3-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000118543 Rpl9-006 protein_coding Mus_musculus 0 481
ENSMUST00000182502 Rpl9-ps1-002 protein_coding Mus_musculus 0 457
ENSMUST00000117199 Rpl9-ps1-001 translated_processed_pseudogene Mus_musculus 0 457
ENSMUST00000147660 Rpl9-004 retained_intron Mus_musculus 0 388
ENSMUST00000173020 Gm5227-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000117730 Gm7206-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000129885 Gm14562-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000122349 Gm12738-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000140879 Rpl9-010 retained_intron Mus_musculus 5.00264e-43 178
ENSMUST00000128074 Rpl9-002 retained_intron Mus_musculus 5.00264e-43 178

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