C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182502 Rpl9-ps1-002 ENSMUSG00000081906 10090 - 11:83645046-83645621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLiverLungOvaryPlacentaTestisENSMUST00000182502
Transcript ID Adipose Bladder Liver Lung Ovary Placenta Testis
ENSMUST00000182502 0.089±0.01 0.037±0.00 0.020±0.01 0.100±0.00 0.058±0.00 0.012±0.00 0.074±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006412 IEA translation
GO:0016020 IEA membrane
GO:0019843 IEA rRNA binding
GO:0022625 IEA cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 682
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 682
ENST00000392269 RP11-256K7.1-001 processed_pseudogene Homo_sapiens 0 457
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 688
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 460
ENST00000420684 AC009500.2-001 processed_pseudogene Homo_sapiens 0 244
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 0 409
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 396
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 682
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 571
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 619
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 688
ENST00000472460 RP11-851M3.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000489563 RPL9P25-001 processed_pseudogene Homo_sapiens 0 625
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 0 379
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 580
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 621
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 590
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0 231
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 621
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 457
ENST00000511643 RPL9-013 retained_intron Homo_sapiens 0 233
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 396
ENST00000561773 TIPIN-006 processed_transcript Homo_sapiens 0 625

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