C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117199 Rpl9-ps1-001 ENSMUSG00000081906 10090 - 11:83645046-83645621 translated_processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 682
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 682
ENST00000392269 RP11-256K7.1-001 processed_pseudogene Homo_sapiens 0 457
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 688
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 460
ENST00000420684 AC009500.2-001 processed_pseudogene Homo_sapiens 0 244
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 0 409
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 396
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 682
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 571
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 619
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 688
ENST00000472460 RP11-851M3.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000489563 RPL9P25-001 processed_pseudogene Homo_sapiens 0 625
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 0 379
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 580
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 621
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 590
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0 231
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 621
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 457
ENST00000511643 RPL9-013 retained_intron Homo_sapiens 0 233
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 396
ENST00000561773 TIPIN-006 processed_transcript Homo_sapiens 0 625

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