C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000412645 AC016739.1-001 ENSG00000230384 9606 + 2:176242111-176242993 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalTestisENST00000412645
Transcript ID Adipose Adrenal Testis
ENST00000412645 0.071±0.00 0.019±0.00 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_00017R CIL_00017R_0001 CGP 2:176188579-176338025

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 730
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 725
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 490
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 468
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 462

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