| Transcript ID | Adipose | Testis |
|---|---|---|
| ENST00000417997 | 0.022±0.00 | 0.450±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | high mobility group box 3 pseudogene 20 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000417997  |
HMGB3P20-001 |
ENSG00000226059 |
9606 | - |
7:26982768-26983367  |
processed_pseudogene |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008V2 | CIL_0008V2_0001 | VISTA | 7:26389078-26990183 |
| CIL_0007OD | CIL_0007OD_0002 | UCNEbase | 7:26506344-27606703 |
| CIL_0003PD | CIL_0003PD_0001 | CGP | 7:26667062-27095996 |
| CIL_0008QL | CIL_0008QL_0001 | VISTA | 7:26816432-27417045 |
| CIL_000911 | CIL_000911_0001 | VISTA | 7:26910239-27511438 |
| CIL_000811 | CIL_000811_0001 | VISTA | 7:26948649-27549872 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000088874
|
Hmgb3-004 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000114582
|
Hmgb3-003 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000015361
|
Hmgb3-002 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000072699
|
Hmgb3-001 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000078030
|
Gm6104-201 | protein_coding | Mus_musculus | 0 | 673 |
|
ENSMUST00000132145
|
Hmgb3-006 | retained_intron | Mus_musculus | 0 | 645 |
|
ENSMUST00000121238
|
Gm11805-001 | processed_pseudogene | Mus_musculus | 0 | 593 |
|
ENSMUST00000120072
|
Gm5060-001 | processed_pseudogene | Mus_musculus | 0 | 556 |
|
ENSMUST00000123100
|
Hmgb3-005 | protein_coding | Mus_musculus | 0 | 538 |
|
ENSMUST00000155930
|
Gm8813-001 | processed_pseudogene | Mus_musculus | 0 | 507 |
|
ENSMUST00000117931
|
Gm12365-001 | processed_pseudogene | Mus_musculus | 0 | 494 |
|
ENSMUST00000176139
|
Gm18367-001 | processed_pseudogene | Mus_musculus | 0 | 486 |
|
ENSMUST00000117806
|
Gm15576-001 | processed_pseudogene | Mus_musculus | 0 | 479 |
|
ENSMUST00000117771
|
Gm5752-001 | processed_pseudogene | Mus_musculus | 0 | 427 |
|
ENSDART00000024750
|
hmgb3b-001 | protein_coding | Danio_rerio | 3.00004e-41 | 172 |
|
ENSDART00000128242
|
hmgb3b-002 | protein_coding | Danio_rerio | 4.00001e-40 | 169 |
|
ENSMUST00000117677
|
Gm13386-001 | processed_pseudogene | Mus_musculus | 5e-29 | 132 |
