C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435879 RP11-254B13.1-001 ENSG00000240087 9606 - 12:68552995-68553882 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000435879
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000435879 0.036±0.00 0.325±0.00 0.035±0.01 0.100±0.00 0.108±0.00 0.052±0.02 0.077±0.00 0.052±0.02 0.127±0.00 0.066±0.02 0.040±0.00 0.085±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 1057
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 1046
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 1022
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 946
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 929
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 628
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 614
ENSMUST00000162286 Gm16228-001 processed_pseudogene Mus_musculus 0 254

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