C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436090 HNRNPA1P8-001 ENSG00000229251 9606 + 7:84983556-84984506 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000436090
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000436090 0.081±0.00 0.142±0.00 0.043±0.00 0.039±0.00 0.026±0.00 0.014±0.00 0.013±0.00 0.014±0.00 0.094±0.06 0.104±0.07 0.106±0.05 1.543±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PY CIL_0008PY_0001 VISTA 7:84764651-85368525

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1269
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1269
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1229
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1206
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1186
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1164
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 1016
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 1013
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 1013
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 979
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 821
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 695
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 1e-36 158

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