C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8885
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189382 RP23-277E3.1-001 ENSMUSG00000101496 10090 + 1:72087857-72088454 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000189382
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000189382 0.167±0.00 0.098±0.02 0.060±0.00 0.761±0.31 0.276±0.13 0.080±0.00 0.165±0.09 0.112±0.01 0.237±0.00 0.548±0.69 0.353±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MJ CIL_0005MJ_0002 CGP 1:71585520-72212307

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 776
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 776
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 760
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 628
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 776
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 577
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 776
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000416625 RPL15P4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000417590 RPL15P4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000419391 RPL15P4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 448
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 614
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 651
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 641
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 776
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 719
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 569
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000445480 RPL15P4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000450413 RPL15P4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000451666 RPL15P4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000456043 RPL15P4-001 processed_pseudogene Homo_sapiens 0 399
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 390
ENST00000457032 RPL15P4-001 processed_pseudogene Homo_sapiens 0 399
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 451
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 516
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 627
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 532
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 734
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 610
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 636
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 342
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 401
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 776

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