C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120694 Rpl15-ps1-001 ENSMUSG00000082874 10090 + 11:21953140-21953703 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryTestisENSMUST00000120694
Transcript ID Brain Liver Ovary Testis
ENSMUST00000120694 0.052±0.00 0.017±0.00 0.160±0.00 0.116±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MW CIL_0007MW_0003 UCNEbase 11:21694041-22206768
CIL_00095K CIL_00095K_0002 VISTA 11:21702480-22303824
CIL_00090Q CIL_00090Q_0002 VISTA 11:21710037-22311279
CIL_00084N CIL_00084N_0002 VISTA 11:21768163-22368901
CIL_000976 CIL_000976_0002 VISTA 11:21778416-22379452

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 448
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 448
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 431
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 329
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 448
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 405
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 448
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 219
ENST00000422772 AC093107.7-001 processed_pseudogene Homo_sapiens 0 359
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 392
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 346
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 448
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 448
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 337
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 244
ENST00000455192 AC092569.2-001 processed_pseudogene Homo_sapiens 2e-38 161
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 219
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 370
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 359
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 353
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 302
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 448
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 366
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 3.00004e-41 172
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 335
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 448

Loading