C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080281 Rpl15-001 ENSMUSG00000012405 10090 - 14:18267823-18271067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080281 26.671±8.57 53.258±6.26 26.021±5.25 57.767±32.86 27.923±12.00 59.642±4.28 18.359±4.49 25.440±3.18 29.737±4.39 22.719±6.73 21.426±3.39 57.826±19.18 28.003±16.47 9.337±4.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 1127
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 970
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 887
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 798
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 1042
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 691
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 957
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 649
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 571
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 771
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 771
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 1029
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 981
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 660
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 540
ENST00000455192 AC092569.2-001 processed_pseudogene Homo_sapiens 0 241
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 599
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 536
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 593
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 721
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 636
ENST00000486836 RP11-113A11.1-001 processed_pseudogene Homo_sapiens 0 669
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 848
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 710
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 721
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 436
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 412
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 1072

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