C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12035
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121890 Gm12035-001 ENSMUSG00000083555 10090 - 11:20574567-20575189 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLiverOvaryPlacentaTestisENSMUST00000121890
Transcript ID Adipose Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000121890 0.087±0.00 0.063±0.00 0.134±0.06 0.079±0.05 0.318±0.00 0.171±0.00 0.183±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OP CIL_0004OP_0002 CGP 11:20302180-20653021

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 675
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 675
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 658
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 569
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 675
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 516
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 675
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 582
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 675
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 531
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 405
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 392
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 547
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 479
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 512
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 514
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 298
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 361
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 675

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