C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12726
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121621 Gm12726-001 ENSMUSG00000082061 10090 + 4:105578340-105578940 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000121621
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000121621 0.407±0.09 0.661±0.00 0.065±0.03 0.230±0.00 0.186±0.00 0.078±0.00 0.038±0.02 0.219±0.09 0.296±0.05 0.205±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Q8 CIL_0007Q8_0002 VISTA 4:105127474-105728608
CIL_00084O CIL_00084O_0002 VISTA 4:105560013-106163946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 774
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 774
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 758
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 640
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 774
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 584
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 774
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 475
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 658
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 652
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 774
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 579
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 412
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 427
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 521
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 630
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 542
ENST00000486836 RP11-113A11.1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 725
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 575
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 614
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 370
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 370
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 774

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