C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13413
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120953 Gm13413-001 ENSMUSG00000083004 10090 + 2:32406055-32406656 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120953
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120953 0.085±0.00 0.065±0.03 0.104±0.07 0.176±0.00 0.184±0.02 0.146±0.04 0.221±0.14 0.145±0.04 0.298±0.21 0.268±0.18 0.155±0.06 0.309±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 791
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 791
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 774
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 652
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 791
ENST00000414329 RP11-106M7.4-001 processed_pseudogene Homo_sapiens 0 562
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 791
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 582
ENST00000416625 RPL15P4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000417590 RPL15P4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000419391 RPL15P4-001 processed_pseudogene Homo_sapiens 0 335
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 462
ENST00000422772 AC093107.7-001 processed_pseudogene Homo_sapiens 0 614
ENST00000422915 RP1-40G4P.1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000432924 RPL15P18-001 processed_pseudogene Homo_sapiens 0 680
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 654
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 791
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000439829 AP002381.2-001 processed_pseudogene Homo_sapiens 0 575
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000445480 RPL15P4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000450413 RPL15P4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000451666 RPL15P4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000455192 AC092569.2-001 processed_pseudogene Homo_sapiens 0 239
ENST00000456043 RPL15P4-001 processed_pseudogene Homo_sapiens 0 335
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 399
ENST00000457032 RPL15P4-001 processed_pseudogene Homo_sapiens 0 335
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 451
ENST00000475247 RP11-214O14.1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 625
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 536
ENST00000486836 RP11-113A11.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 737
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 606
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 621
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 372
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 372
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 791

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