C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16210
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122161 Gm16210-001 ENSMUSG00000081608 10090 - 10:39752259-39752868 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122161 1.352±1.44 0.309±0.10 0.333±0.00 1.169±0.08 0.368±0.20 0.800±0.35 0.153±0.08 0.517±0.23 0.219±0.13 0.460±0.28 0.099±0.00 1.119±0.54 0.178±0.09 0.544±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000954 CIL_000954_0002 VISTA 10:39357714-39964005

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307839 RPL15-001 protein_coding Homo_sapiens 0 737
ENST00000354811 RPL15-007 protein_coding Homo_sapiens 0 737
ENST00000391491 RPL15P3-001 processed_pseudogene Homo_sapiens 0 721
ENST00000412097 RPL15-011 protein_coding Homo_sapiens 0 616
ENST00000413699 RPL15-002 protein_coding Homo_sapiens 0 737
ENST00000415719 RPL15-013 protein_coding Homo_sapiens 0 737
ENST00000416278 RP11-570G20.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000422218 RPL15-009 protein_coding Homo_sapiens 0 460
ENST00000429515 AC097523.1-001 processed_pseudogene Homo_sapiens 0 490
ENST00000434031 RPL15-014 protein_coding Homo_sapiens 0 628
ENST00000435882 RPL15-005 protein_coding Homo_sapiens 0 737
ENST00000436146 RPL15-008 nonsense_mediated_decay Homo_sapiens 0 686
ENST00000439981 RPL15P1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000456530 RPL15-201 protein_coding Homo_sapiens 0 414
ENST00000465786 RPL15-006 retained_intron Homo_sapiens 0 387
ENST00000475768 AP000797.1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000477936 RP11-113C12.2-001 processed_pseudogene Homo_sapiens 0 604
ENST00000482912 RPL15P20-001 processed_pseudogene Homo_sapiens 0 516
ENST00000487352 RP11-100N21.1-001 processed_pseudogene Homo_sapiens 0 678
ENST00000490223 RPL15-004 retained_intron Homo_sapiens 0 534
ENST00000490252 RPL15P2-001 processed_pseudogene Homo_sapiens 0 573
ENST00000560630 RP11-325E5.4-001 processed_pseudogene Homo_sapiens 0 340
ENST00000567709 RP11-151H2.3-001 processed_pseudogene Homo_sapiens 0 342
ENST00000611050 RPL15-202 protein_coding Homo_sapiens 0 737

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