C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23a pseudogene 64
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000469465 RPL23AP64-001 ENSG00000240970 9606 - 11:119003012-119003446 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000469465
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000469465 0.488±0.00 4.524±0.00 0.129±0.00 0.927±0.62 0.619±0.01 0.363±0.11 0.299±0.00 0.213±0.09 0.234±0.15 1.052±0.00 1.345±0.67 0.103±0.04 0.786±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021U CIL_00021U_0002 CGP 11:118971707-119015791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 279
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 274
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 261
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 255
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 243
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 196
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 2.94273e-44 182
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 2.94273e-44 182
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 1.99965e-42 176
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 6.00036e-42 174
ENSMUST00000187124 RP23-466F9.2-001 processed_pseudogene Mus_musculus 3e-40 169
ENSMUST00000186898 RP23-466F9.4-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 1e-38 163
ENSMUST00000191583 Rpl23a-ps11-001 processed_pseudogene Mus_musculus 2e-36 156
ENSMUST00000188369 Rpl23a-ps9-001 processed_pseudogene Mus_musculus 2e-36 156
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 3e-35 152
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 2e-32 143
ENSMUST00000187984 RP23-349I9.11-001 processed_pseudogene Mus_musculus 7e-31 137
ENSMUST00000187903 RP23-349I9.24-001 processed_pseudogene Mus_musculus 7e-31 137
ENSMUST00000185244 RP23-349I9.15-001 processed_pseudogene Mus_musculus 9e-30 134
ENSMUST00000185511 Rpl23a-ps10-001 processed_pseudogene Mus_musculus 4e-23 111

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