C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 20900
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078729 Gm20900-201 ENSMUSG00000078180 10090 - 13:120304194-120304655 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000078729
Transcript ID Adipose Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000078729 0.219±0.00 3.610±3.25 0.911±0.81 0.594±0.26 0.113±0.00 1.480±2.31 0.228±0.09 0.732±0.22 0.562±0.42 0.901±1.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 549
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 551
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 551
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 429
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 326
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 575
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 569
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 283
ENST00000440453 RP11-170J3.2-001 processed_pseudogene Homo_sapiens 0 479
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 520
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 510
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 470
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 0 261
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 575
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 542
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 553
ENST00000475608 RP11-16F15.1-001 processed_pseudogene Homo_sapiens 0 521
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 551
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 529
ENST00000582736 RPL23A-008 retained_intron Homo_sapiens 0 259
ENST00000588044 RPL23AP77-001 processed_pseudogene Homo_sapiens 0 494
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 298

Loading