C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 3362
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148102 Gm3362-001 ENSMUSG00000085442 10090 - 15:37943327-37943792 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148102
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148102 0.119±0.02 14.416±13.68 4.070±3.77 0.376±0.21 0.106±0.00 0.299±0.19 9.545±10.45 0.125±0.00 0.645±0.42 0.336±0.15 0.297±0.13 0.112±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00000S CIL_00000S_0002 CGP 15:37923952-38078853

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 527
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 529
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 529
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 436
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 298
ENST00000416139 RP11-384C4.3-001 processed_pseudogene Homo_sapiens 0 529
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 573
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 292
ENST00000440453 RP11-170J3.2-001 processed_pseudogene Homo_sapiens 0 479
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 501
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 520
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 470
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 0 257
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 573
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 536
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 531
ENST00000475608 RP11-16F15.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 503
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000492507 RPL23AP73-001 processed_pseudogene Homo_sapiens 0 351
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 529
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 344
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 490
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000576277 CTC-281F24.2-001 processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 516
ENST00000582736 RPL23A-008 retained_intron Homo_sapiens 0 272
ENST00000588044 RPL23AP77-001 processed_pseudogene Homo_sapiens 0 492
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 300

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