C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein 23A, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085632 Rpl23a-ps1-001 ENSMUSG00000070896 10090 + 1:45981548-45982012 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryTestisENSMUST00000085632
Transcript ID Brain Liver Muscle Ovary Testis
ENSMUST00000085632 0.024±0.00 0.017±0.00 0.160±0.00 0.421±0.23 0.094±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 416
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 418
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 418
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 351
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 451
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 244
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 392
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 364
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 2.94273e-44 182
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 451
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 429
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 420
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 388
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 268
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 377
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 342
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 418
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 248
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 420
ENST00000582736 RPL23A-008 retained_intron Homo_sapiens 0 239
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 255

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