C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5384
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120313 Gm5384-001 ENSMUSG00000080998 10090 + X:19893657-19894119 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLiverOvaryENSMUST00000120313
Transcript ID Bladder Colon Kidney Liver Ovary
ENSMUST00000120313 0.048±0.00 0.228±0.00 0.117±0.00 0.164±0.00 0.091±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259951 HLA-F-003 protein_coding Homo_sapiens 0 274
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 510
ENST00000383516 HLA-F-003 protein_coding Homo_sapiens 0 274
ENST00000383627 HLA-F-003 protein_coding Homo_sapiens 0 274
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 512
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 512
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 446
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 313
ENST00000417214 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 549
ENST00000425139 HLA-F-005 protein_coding Homo_sapiens 0 274
ENST00000426470 HLA-F-005 protein_coding Homo_sapiens 0 274
ENST00000428296 HLA-F-003 protein_coding Homo_sapiens 0 274
ENST00000428990 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000430472 HLA-F-003 protein_coding Homo_sapiens 0 268
ENST00000430582 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000433438 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 318
ENST00000444621 HLA-F-005 protein_coding Homo_sapiens 0 274
ENST00000445657 HLA-F-003 protein_coding Homo_sapiens 0 274
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 473
ENST00000446846 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000448064 HLA-F-005 protein_coding Homo_sapiens 0 268
ENST00000452916 HLA-F-005 protein_coding Homo_sapiens 0 274
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 499
ENST00000458026 HLA-F-005 protein_coding Homo_sapiens 0 274
ENST00000458419 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 442
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 0 252
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 545
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 555
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 514
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 492
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 440
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 512
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 468
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 499
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 324
ENST00000623642 AL589822.1-201 pseudogene Homo_sapiens 0 473

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