C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8112
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180011 Gm8112-201 ENSMUSG00000096623 10090 - 10:81693718-81694185 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180011
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180011 0.250±0.15 0.411±0.06 0.645±0.24 0.489±0.37 0.282±0.10 0.158±0.04 0.184±0.05 0.246±0.00 0.176±0.04 1.173±0.62 0.430±0.13 0.309±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 516
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 518
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 518
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 455
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 315
ENST00000412728 AC104634.2-001 processed_pseudogene Homo_sapiens 0 425
ENST00000416139 RP11-384C4.3-001 processed_pseudogene Homo_sapiens 0 507
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 562
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 311
ENST00000440453 RP11-170J3.2-001 processed_pseudogene Homo_sapiens 0 484
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 490
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 538
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 459
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 0 243
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 562
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 520
ENST00000475608 RP11-16F15.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 363
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000492507 RPL23AP73-001 processed_pseudogene Homo_sapiens 0 346
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 518
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000576277 CTC-281F24.2-001 processed_pseudogene Homo_sapiens 3.99931e-42 174
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 496
ENST00000582736 RPL23A-008 retained_intron Homo_sapiens 0 246
ENST00000588044 RPL23AP77-001 processed_pseudogene Homo_sapiens 0 496
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 320

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