C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477007 RP11-106M3.1-001 ENSG00000243007 9606 - 15:72379215-72379710 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungMuscleOvaryTestisENST00000477007
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000477007 0.067±0.00 0.107±0.00 0.148±0.00 0.135±0.00 0.328±0.00 0.139±0.00 0.123±0.00 0.213±0.13 0.229±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 575
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 575
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 569
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 553
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 531
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 5e-38 161
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 1e-34 150
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 2e-27 126

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