C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3j
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000479986 HIST1H3J-002 ENSG00000197153 9606 - 6:27890635-27893106 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000479986
Transcript ID Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000479986 15.137±0.00 0.317±0.11 2.329±0.00 0.244±0.00 4.697±0.00 20.090±0.00 0.287±0.17 0.238±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078756 Hist2h2aa2-001 protein_coding Mus_musculus 0 409
ENSMUST00000074976 Hist2h2aa1-001 protein_coding Mus_musculus 0 409
ENSMUST00000091708 Hist1h2al-201 protein_coding Mus_musculus 0 409
ENSMUST00000091751 Hist1h2an-001 protein_coding Mus_musculus 0 398
ENSMUST00000090776 Hist1h2ad-001 protein_coding Mus_musculus 0 398
ENSMUST00000091741 Hist1h2ag-001 protein_coding Mus_musculus 0 398
ENSMUST00000081342 Hist1h2ap-001 protein_coding Mus_musculus 0 398
ENSMUST00000102969 Hist1h2ae-001 protein_coding Mus_musculus 0 398
ENSMUST00000091745 Hist1h2ao-001 protein_coding Mus_musculus 0 398
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0 396
ENSMUST00000091742 Hist1h2ah-001 protein_coding Mus_musculus 0 392
ENSMUST00000171127 Hist1h2ac-001 protein_coding Mus_musculus 0 392
ENSMUST00000070124 Hist1h2ai-001 protein_coding Mus_musculus 0 390
ENSMUST00000090782 Hist2h2ac-001 protein_coding Mus_musculus 0 388
ENSMUST00000073261 Hist1h2af-001 protein_coding Mus_musculus 0 381
ENSMUST00000074752 Hist1h2ak-001 protein_coding Mus_musculus 0 368
ENSMUST00000091710 Hist1h2aj-001 unprocessed_pseudogene Mus_musculus 0 363
ENSMUST00000052686 H2afx-001 protein_coding Mus_musculus 0 340
ENSMUST00000074556 H2afj-001 protein_coding Mus_musculus 0 315
ENSMUST00000108817 Hist3h2a-001 protein_coding Mus_musculus 0 303
ENSMUST00000047697 Trim17-002 protein_coding Mus_musculus 0 303
ENSMUST00000072391 Hist1h2aa-001 protein_coding Mus_musculus 0 278
ENSMUST00000118168 Gm11336-001 unprocessed_pseudogene Mus_musculus 0 274
ENSMUST00000073115 Hist2h2ab-001 protein_coding Mus_musculus 0 270

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