C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492925 RP11-413E6.1-001 ENSG00000243422 9606 - 3:75624686-75625153 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492925
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492925 0.599±0.00 0.287±0.00 0.125±0.00 1.089±0.54 1.284±1.08 0.068±0.00 0.768±0.18 0.647±0.00 0.360±0.00 0.350±0.00 0.031±0.00 0.550±0.11 0.192±0.15 0.663±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120313 Gm5384-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000102483 Rpl23a-001 protein_coding Mus_musculus 0 446
ENSMUST00000104925 Rpl23a-ps3-201 protein_coding Mus_musculus 0 440
ENSMUST00000078729 Gm20900-201 processed_pseudogene Mus_musculus 0 436
ENSMUST00000096020 Gm10335-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000099431 Gm10132-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000127270 Rpl23a-002 retained_intron Mus_musculus 0 435
ENSMUST00000180011 Gm8112-201 processed_pseudogene Mus_musculus 0 433
ENSMUST00000148102 Gm3362-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000085589 Gm6177-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000119136 Gm8217-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000118777 Rpl23a-ps14-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000105085 Gm10923-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000085632 Rpl23a-ps1-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000121605 Gm12322-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000105087 Gm3940-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000178439 Gm21959-201 processed_pseudogene Mus_musculus 0 326
ENSMUST00000121008 Rpl23a-ps4-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000187124 RP23-466F9.2-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000187732 RP23-349I9.17-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000187331 RP23-466F9.8-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000189660 RP23-466F9.10-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000187903 RP23-349I9.24-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000187984 RP23-349I9.11-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000185244 RP23-349I9.15-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000186898 RP23-466F9.4-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000191583 Rpl23a-ps11-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000161498 Gm16303-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000188369 Rpl23a-ps9-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000185511 Rpl23a-ps10-001 processed_pseudogene Mus_musculus 0 263

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