C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10923
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105085 Gm10923-001 ENSMUSG00000078289 10090 + 15:85116870-85117287 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000105085
Transcript ID Adipose Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000105085 0.138±0.00 0.148±0.02 0.191±0.10 0.120±0.00 0.148±0.00 0.041±0.01 0.135±0.00 0.284±0.17 0.155±0.18 1.206±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054D CIL_00054D_0002 CGP 15:85037062-85131957
CIL_00054C CIL_00054C_0002 CGP 15:85064691-85144569

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 420
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 460
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 460
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 460
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 342
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 292
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 460
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000440453 RP11-170J3.2-001 processed_pseudogene Homo_sapiens 0 403
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 414
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 383
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 460
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 429
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 460
ENST00000475608 RP11-16F15.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 401
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 460
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 276
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 442
ENST00000582736 RPL23A-008 retained_intron Homo_sapiens 1e-39 167
ENST00000588044 RPL23AP77-001 processed_pseudogene Homo_sapiens 0 394
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 206

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