C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: actinin, alpha 3 (gene/pseudogene)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502692 ACTN3-003 ENSG00000248746 9606 + 11:66546395-66563326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastTestisENST00000502692
Transcript ID Breast Testis
ENST00000502692 0.044±0.00 0.744±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0006936 IEA muscle contraction
GO:0030017 IEA sarcomere
GO:0030018 IEA Z disc
GO:0051015 IEA actin filament binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006626 Actn3-001 protein_coding Mus_musculus 0 3199
ENSDART00000005682 actn3a-001 protein_coding Danio_rerio 0 1539
ENSMUST00000168193 Actn2-201 protein_coding Mus_musculus 0 1493
ENSMUST00000064204 Actn2-001 protein_coding Mus_musculus 0 1493
ENSMUST00000167327 Actn1-202 protein_coding Mus_musculus 0 1476
ENSMUST00000021554 Actn1-201 protein_coding Mus_musculus 0 1380
ENSMUST00000068045 Actn4-001 protein_coding Mus_musculus 0 1319
ENSDART00000123678 actn1-202 protein_coding Danio_rerio 0 1195
ENSMUST00000138811 Actn3-002 processed_transcript Mus_musculus 0 1112
ENSDART00000100217 actn1-201 protein_coding Danio_rerio 0 1081
ENSDART00000133740 actn1-002 nonsense_mediated_decay Danio_rerio 0 1081
ENSDART00000140243 actn1-001 protein_coding Danio_rerio 0 1081
ENSMUST00000127210 Actn4-005 protein_coding Mus_musculus 0 955
ENSMUST00000144909 Actn4-002 processed_transcript Mus_musculus 0 789
ENSDART00000130717 ACTN4 (3 of 3)-201 protein_coding Danio_rerio 0 392
ENSMUST00000150493 Actn4-006 processed_transcript Mus_musculus 0 385
ENSMUST00000110616 Actn2-002 protein_coding Mus_musculus 0 305
ENSDART00000050258 protein_coding Danio_rerio 0 237

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