C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509706 HNRNPA1P4-001 ENSG00000206228 9606 - 8:82291624-82292379 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLungMuscleOvaryTestisENST00000509706
Transcript ID Adipose Adrenal Brain Colon Kidney Lung Muscle Ovary Testis
ENST00000509706 0.069±0.00 0.091±0.00 0.074±0.04 0.067±0.00 0.036±0.00 0.018±0.00 0.034±0.02 0.024±0.00 0.029±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1070
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1068
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1046
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1003
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1000
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 992
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 885
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 878
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 809
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 758
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 752
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 5e-35 152

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