C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515379 HNRNPA1P12-001 ENSG00000220157 9606 - 5:80359080-80360040 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000515379
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000515379 0.055±0.00 0.231±0.00 0.163±0.00 0.102±0.00 0.159±0.00 0.117±0.00 0.026±0.00 0.057±0.00 0.076±0.00 0.082±0.03 0.051±0.00 0.065±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1284
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1284
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1238
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1212
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1182
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1179
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 1014
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 979
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 979
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 950
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 861
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000189260 RP23-389M9.4-001 processed_pseudogene Mus_musculus 0 527
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 484
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 5e-31 139

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