C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tubulin, alpha 1c | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000552125  |
TUBA1C-009 |
ENSG00000167553 |
9606 | + |
12:49228043-49269937  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00000B | CIL_00000B_0001 | CGP | 12:49127782-49189324 |
| CIL_00009R | CIL_00009R_0001 | CGP | 12:49188736-49298686 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000122404
|
Gm14150-001 | processed_pseudogene | Mus_musculus | 0 | 529 |
|
ENSMUST00000077577
|
Tuba1b-001 | protein_coding | Mus_musculus | 0 | 518 |
|
ENSMUST00000058914
|
Tuba1c-201 | protein_coding | Mus_musculus | 0 | 518 |
|
ENSMUST00000097014
|
Tuba1a-001 | protein_coding | Mus_musculus | 0 | 512 |
|
ENSMUST00000077991
|
Gm5620-001 | processed_pseudogene | Mus_musculus | 0 | 503 |
|
ENSMUST00000169666
|
Gm6682-201 | processed_pseudogene | Mus_musculus | 0 | 453 |
|
ENSMUST00000169182
|
Gm3756-201 | processed_pseudogene | Mus_musculus | 0 | 444 |
|
ENSMUST00000029297
|
Slc7a11-001 | protein_coding | Mus_musculus | 0 | 429 |
|
ENSMUST00000140969
|
Tuba1b-002 | retained_intron | Mus_musculus | 0 | 355 |
|
ENSMUST00000087445
|
Tuba3b-001 | protein_coding | Mus_musculus | 0 | 329 |
|
ENSMUST00000032233
|
Tuba8-001 | protein_coding | Mus_musculus | 6e-33 | 145 |
|
ENSMUST00000037912
|
Ssh2-001 | protein_coding | Mus_musculus | 0.00000002 | 64 |
|
ENSMUST00000074912
|
2010012O05Rik-201 | protein_coding | Mus_musculus | 0.0000008 | 58 |
